diff --git a/README.md b/README.md index feea0f2..9cda51b 100644 --- a/README.md +++ b/README.md @@ -1,22 +1,24 @@ # HIV_ALT-803 Multi-scale model of viral and immune dynamics in response to treatment with IL-15 superagonist ALT-803 -'Legacy Code' = folder for older versions of code that has either been condensed or moved to another repository +'N803_model_1.m' = final single-compartment model for article 1 -'HIV_model_5.m' = version 5 (seperates CD8+ T cells into resting, active-proliferating, and active-effector populations) +'sorter.m' = function that sorts results from 'calibrator.m' by outcome -'HIV_model_4.m' = version 4 (adds density-dependent drug-induced proliferation and immune suppression of effector population) +'Legacy Code' = folder for older versions of code that has either been condensed or moved to another repository -'HIV_model_3.m' = version 3 of simplified model (removed IL15 and adds tolerance and exhaustion delay compartments) + 'HIV_model_5.m' = version 5 (seperates CD8+ T cells into resting, active-proliferating, and active-effector populations) -'HIV_model_2.m' = version 2 of simplified model (homeostasis by density-dependent proliferation rather than generation) + 'HIV_model_4.m' = version 4 (adds density-dependent drug-induced proliferation and immune suppression of effector population) -'HIV_model_1.m' = simplified model used in BMES2018 poster + 'HIV_model_3.m' = version 3 of simplified model (removed IL15 and adds tolerance and exhaustion delay compartments) -'plotter_model_5.m' = function that plot results from 'calibrator.m' (specific to HIV_model_5) + 'HIV_model_2.m' = version 2 of simplified model (homeostasis by density-dependent proliferation rather than generation) -'plotter_model_4.m' = function that plot results from 'calibrator.m' (specific to HIV_model_4) + 'HIV_model_1.m' = simplified model used in BMES2018 poster -'plotter.m' = function that plot results from 'calibrator.m' (specific to HIV_model_2) + 'plotter_model_5.m' = function that plot results from 'calibrator.m' (specific to HIV_model_5) -'sorter.m' = function that sorts results from 'calibrator.m' by outcome + 'plotter_model_4.m' = function that plot results from 'calibrator.m' (specific to HIV_model_4) + + 'plotter.m' = function that plot results from 'calibrator.m' (specific to HIV_model_2)