From 571b4a2ffbf531ca88b6028cd8ec629de591c21c Mon Sep 17 00:00:00 2001
From: David Minton <daminton@purdue.edu>
Date: Wed, 24 May 2023 13:13:20 -0400
Subject: [PATCH] Fixed issue in the environment variable setter, as it was
 only pointing to the directory and not the swiftest.sif file itself

---
 singularity/pull      | 3 +--
 singularity/setenv.sh | 2 +-
 2 files changed, 2 insertions(+), 3 deletions(-)
 mode change 100644 => 100755 singularity/setenv.sh

diff --git a/singularity/pull b/singularity/pull
index 8946e4869..a62acaf6e 100755
--- a/singularity/pull
+++ b/singularity/pull
@@ -1,3 +1,2 @@
 #!/bin/sh --
-singularity pull swiftest.sif docker://daminton/swiftest:latest
-source ./setenv.sh
\ No newline at end of file
+singularity pull --force swiftest.sif docker://daminton/swiftest:latest
diff --git a/singularity/setenv.sh b/singularity/setenv.sh
old mode 100644
new mode 100755
index 769339754..79931a298
--- a/singularity/setenv.sh
+++ b/singularity/setenv.sh
@@ -1,3 +1,3 @@
 #!/bin/sh
 # source this file to set the path to the swiftest.sif file
-export SWIFTEST_SIF=${PWD}
\ No newline at end of file
+export SWIFTEST_SIF="${PWD}/swiftest.sif"