From e9063044e3bdfa274de491f74173762b4dbd821d Mon Sep 17 00:00:00 2001 From: "Oh, Sungchan" Date: Wed, 31 Jul 2024 10:19:47 -0400 Subject: [PATCH] Update README.md --- README.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index 2793bc5..b10a062 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@ This GitHub repository provides a comprehensive resource for analyzing high-throughput phenotyping (HTP) data from the [Ag Alumni Seed Phenotyping Facility (AAPF, Purdue)](https://ag.purdue.edu/aapf/), including a detailed guide and a collection of data processing tools. It includes foundational [R](https://www.r-project.org/) tools for transforming AAPF data products (RGB, hyperspectral, X-ray) into an analysis-ready dataset ([long format table](http://www.cookbook-r.com/Manipulating_data/Converting_data_between_wide_and_long_format/)). This standardized dataset can be directly used in statistical modeling and visualization using R. -## AAPF Data Guide +## AAPF Data Guide 📖 * [RGB imaging data (above-ground)](DataGuide_AAPF_RGB.md) * [Hyperspectral imaging (HSI) data (above-ground)](DataGuide_AAPF_HSI.md) @@ -15,9 +15,9 @@ This GitHub repository provides a comprehensive resource for analyzing high-thro * Reshape data product (masterfile, .xlsx) into analysis-ready format - [RGB and HSI data](reshape_rgb_hsi.r) - [X-ray data](reshape_xray.r) -* Plant trait assessment +* Plant trait assessment 📐 - [Repeatability](calculate_repeatability.r) -* Visualization +* Visualization 😎 - [Overall comparison of repeatability from various sensors and camera positions](display.repeatability.r) - [Variance of plant traits across hybrid, treatment, etc.](display_variance.r) - [2D projections of high-dimensional clusters](display_cluster.r)