From 0a41b2146dd60f76fad8e149308f45f2734d482e Mon Sep 17 00:00:00 2001 From: "Davidson, Josiah Levi" Date: Tue, 3 Jun 2025 08:53:33 -0400 Subject: [PATCH] Updated comments for PrimerScore initialize --- PrimerScore.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/PrimerScore.py b/PrimerScore.py index 04cb912..2215273 100644 --- a/PrimerScore.py +++ b/PrimerScore.py @@ -41,6 +41,8 @@ # plateau phase ending, positive reaction calculation threshold, # and false positive threshold, respectively # set_replicates := Number of replicates. Must be the same for all primer sets. +# set_instrument_signal := Maximum fluorescent intensity of instrument. Default is 140000 +# set_threshold_perc := Threshold percentage of maximum fluorescent intensity of instrument. Default is 0.1 def initialize(set_weights = [5, 5, 10, 20, 60], set_thresholds = [3000, 200, 0.9, 0.2], set_replicates = 4, set_instrument_signal = 140000, set_threshold_perc = 0.1): if not (len(set_weights) == 5): raise ValueError('Weights do not contain 5 values. Refer to readme for more information.')