From 3a89b9bfd3ae32b59a3df655b426eb6cc24f3978 Mon Sep 17 00:00:00 2001 From: Zhongli Jiang Date: Sun, 1 May 2022 02:36:15 -0400 Subject: [PATCH] remove print gtf --- script/adj/protein_coding_gtex.R | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/script/adj/protein_coding_gtex.R b/script/adj/protein_coding_gtex.R index 2ffba85..99a50a2 100644 --- a/script/adj/protein_coding_gtex.R +++ b/script/adj/protein_coding_gtex.R @@ -1,8 +1,7 @@ - ##Filter and order genes library(data.table) library(rtracklayer) -print(Sys.getenv("gtf")) + gtf <- rtracklayer::import(Sys.getenv("gtf")) gtf <- as.data.frame(gtf) gtf[, 1] <- substring(gtf[, 1], 4)