From ac6c8d463d533c4db6572a8c55f5b45e320c0b47 Mon Sep 17 00:00:00 2001 From: "Zhang, Dabao" Date: Fri, 20 May 2022 16:11:56 -0400 Subject: [PATCH] Update geno_prep_portal.sh --- script/geno_prep_portal.sh | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/script/geno_prep_portal.sh b/script/geno_prep_portal.sh index 28c41f1..9a7b441 100755 --- a/script/geno_prep_portal.sh +++ b/script/geno_prep_portal.sh @@ -28,7 +28,7 @@ usage() { echo " --nchr chromosome number" echo " --r | --ref reference file for imputation" echo " --gmap genomic map file" - echo " --i | --int interval length for impute2" + echo " --i | --int interval length for IMPUTE2" echo " --ncores number of cores" echo " --resg result prefix" exit -1 @@ -141,6 +141,6 @@ do file_check $(eval "$(echo "echo \$${i}")") done -$SIGNET_SCRIPT_ROOT/geno_prep/geno_prep.sh && echo "Genotype Preprocessing Finished" +$SIGNET_SCRIPT_ROOT/geno_prep/geno_prep.sh && echo "Genotype preprocessing ... competed!" echo -e "Finish time: $(date)"