From d8ad3c3ceb0fee8e685e5cd18d502b4b7ae663cc Mon Sep 17 00:00:00 2001 From: "Jiang, Zhongli" Date: Sat, 21 May 2022 14:55:54 -0400 Subject: [PATCH] Update LICENSE_THIRD_PARTY.md --- LICENSE_THIRD_PARTY.md | 37 ++++++++++++++++++++++++++++++++++++- 1 file changed, 36 insertions(+), 1 deletion(-) diff --git a/LICENSE_THIRD_PARTY.md b/LICENSE_THIRD_PARTY.md index cd802fc..19ffe3e 100644 --- a/LICENSE_THIRD_PARTY.md +++ b/LICENSE_THIRD_PARTY.md @@ -3,7 +3,7 @@ ## SIGNET integrated code from the following projects, we describe their license below. -### We integrated and modified GTEx pipeline available under `script/geno_prep` and `script/gexp_prep` from +### We integrated and modified GTEx pipeline available under `script/geno_prep` from https://github.com/broadinstitute/gtex-pipeline. @@ -41,6 +41,41 @@ OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +### We integrated and modified GTEx pipeline available under `script/gexp_prep` from + +https://github.com/francois-a/rnaseq-utils + +### The code is subject to their license + +https://github.com/francois-a/rnaseq-utils/blob/1e9c717df017e83bb1238cad2dcf39590694410d/LICENSE.txt + +Copyright (c) 2016-2019, Broad Institute, Inc. All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name Broad Institute, Inc. nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + ### We integrated and modified the code under `script/cis-eQTL` from