Permalink
Cannot retrieve contributors at this time
Name already in use
A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?
SciRep2020-Data-and-Files/ViewIntraSet_Log.txt
Go to fileThis commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
152 lines (129 sloc)
1.92 KB
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| ViewIntraSetLog | |
| Logged from ViewIntraSet.m | |
| 30-Aug-2020 | |
| /ABCs/Apps/OCI/HOV | |
| Test Set | |
| Rclass =_10_12_13 | |
| Sclass =_9_11_14_16_18_19_20_22_23 | |
| Tclass =_2_3_4_5_7_8_15_17_21_1_6 | |
| Excluded Patients =_1_2_3_4_5_6_7_8_15_17_21 | |
| biomarker fselectype =6 | |
| NumSelectBiomarker =9 | |
| compressin =0 | |
| IntraSetType =0 | |
| compenDR =0 | |
| compTimeDrift =0 | |
| DataType (real/rand) =1 | |
| cleanup =010 | |
| new DQ =0 | |
| Domminant differentiating drugs | |
| tax+carb =6 | |
| carb =2 | |
| tax =0 | |
| Domminant differentiating drug pairs | |
| tax+carb =3 | |
| carb =1 | |
| tax =0 | |
| Ttest differentiating biomarkers | |
| SH =2_out of_31 | |
| BM7carb | |
| BM4tax+carb | |
| Refined Biomarkers | |
| Nrefined =4 | |
| BM7carb: z =0.95 | |
| BM2tax+carb: z =0.75 | |
| BM4tax+carb: z =0.84 | |
| BM7tax+carb: z =0.79 | |
| Avg z =0.82908 | |
| Radial Core: Sensitive | |
| ACC loglikF =1 | |
| ACC Recur =0.92 | |
| ACC Percept =1 | |
| ACC zsum =1 | |
| ACC csum =0.92 | |
| ACC RadSep =0.75 | |
| ACC Network =0.92 | |
| ACC Avg =1 | |
| ACC Vote =0.92 | |
| Corr loglikF =-0.79 | |
| Corr Recur =-0.81 | |
| Corr Percept =-0.93 | |
| Corr zsum =-0.71 | |
| Corr csum =-0.58 | |
| Corr RadSep =-0.12 | |
| Corr Network =-0.82 | |
| Corr Avg =-0.9 | |
| Corr Vote =-0.76 | |
| Statistical Power | |
| H =1 | |
| P =9 | |
| CIn1 =0.45 | |
| CIn2 =0.93 | |
| D =0.69 | |
| stderr =0.15 | |
| Power =1 | |
| Patient List | |
| NpatR =3 | |
| NpatS =9 | |
| Npat =12 | |
| hov14=-1 | |
| hov16=-1 | |
| hov17=-1 | |
| hov13=1 | |
| hov15=1 | |
| hov18a=1 | |
| hov20=1 | |
| hov22=1 | |
| hov23=1 | |
| hov25=1 | |
| hov30=1 | |
| hov31=1 | |
| Average Ensemble Performance | |
| hov14 =-0.5844 | |
| hov16 =-0.5456 | |
| hov17 =-0.13321 | |
| hov13 =0.3499 | |
| hov15 =0.1629 | |
| hov18a =0.4726 | |
| hov20 =0.033718 | |
| hov22 =0.29943 | |
| hov23 =0.32229 | |
| hov25 =0.1838 | |
| hov30 =0.32565 | |
| hov31 =0.27298 | |
| Thresh =-0.12637 | |
| AUC =1 | |
| ACC =1 | |
| SENS =1 | |
| SPEC =1 | |
| NPV =1 | |
| PPV =1 | |
| Corr =-0.89919 | |
| Average Pretest Performance | |
| Ntest =11 | |
| hov7 =-0.71767-** | |
| hov8 =-0.59519-** | |
| hov8b =-0.56592-** | |
| hov9 =-0.6895-** | |
| hov11 =-0.39227-** | |
| hov12 =-0.70227-** | |
| hov18b =-0.024017 | |
| hov20b =-0.70342-** | |
| hov26 =-0.78277-** | |
| hov5 =-0.085873 | |
| hov10 =0.28412 | |
| Total Performance | |
| N =12 | |
| Thresh =-0.12637 | |
| p =6.9096e-05 | |
| AUC =1 | |
| ACC =1 | |
| SENS =1 | |
| SPEC =1 | |
| NPV =1 | |
| PPV =1 | |
| TP =0.25 | |
| TN =0.75 | |
| FP =0 | |
| FN =0 | |
| Average ML Test Performance |