Code for metabarcoding analysis (16s & ITS) of tomato rhizosphere soil microbiomes collected at two timepoints in the season (early vs late) from four cultivars with varying tolerance to insect herbivore damage.
This repostory contains all code for data analysis and figure generation for the manuscript "Characterizing rhizosphere microbial communities associated with tolerance to aboveground herbivory in wild and domesticated tomatoes". Authors: Emily Tronson, Ian Kaplan, and Laramy Enders. Front. Microbiol., 14 September 2022 Sec. Microbe and Virus Interactions with Plants. Volume 13 - 2022 | https://doi.org/10.3389/fmicb.2022.981987
