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Update README_RGB.md
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oh231 authored Jun 27, 2024
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Expand Up @@ -79,19 +79,19 @@ These image files visually represent morphological measurements on the vegetatio

The spreadsheets contains various phenotypic measurements derived from the RGB images. Here's a breakdown of the column headers:

- frame_nr: Frame number from 0-11 for side view data
- Angle: Side view angle where the vegetation is most dispersed
- Width, Height: Dimensions of the green box in the corresponding MES file
- Surface: Area of the vegetation measured by the red polygon (Section 2)
- Convex hull: Area of the convex hull measured by the blue polygon
- Roundedness: Roundness of the red polygon (calculation method unclear)
- Center_of_mass_distance: Unclear meaning
- Center_of_mass_x, Center_of_mass_y: Coordinates of the center of mass point
- Hue, Saturation, Intensity: Average values for these color properties in the image
- Fluorescence: Average fluorescence intensity
- H###, S##, V##: Frequency of pixels with specific hue (###: 0-359), saturation (##: 0-99), and intensity (##: 0-99) values
- F##: Frequency of pixels with a specific fluorescence value (##: 0-99)
- View:
- `frame_nr`: Frame number from 0-11 for side view data
- `Angle`: Side view angle where the vegetation is most dispersed
- `Width`, `Height`: Dimensions of the green box in the corresponding MES file
- `Surface`: Area of the vegetation measured by the red polygon (Section 2)
- `Convex hull`: Area of the convex hull measured by the blue polygon
- `Roundedness`: Roundness of the red polygon (calculation method unclear)
- `Center_of_mass_distance`: Unclear meaning
- `Center_of_mass_x`, `Center_of_mass_y`: Coordinates of the center of mass point
- `Hue, Saturation`, Intensity: Average values for these color properties in the image
- `Fluorescence`: Average fluorescence intensity
- `H###`, `S##`, `V##`: Frequency of pixels with specific hue (###: 0-359), saturation (##: 0-99), and intensity (##: 0-99) values
- `F##`: Frequency of pixels with a specific fluorescence value (##: 0-99)
- `View`:
- TOP FRAME: Ignore this row
- TOP AVG: Data from the top view
- Side{Bottom, Small, Top, Full} FRAME 0 to 11: Data from various side view angles (0, 30, ..., 330 degrees)
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