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Update DataGuide_AAPF_RGB.md
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oh231 authored Jun 28, 2024
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28 changes: 2 additions & 26 deletions DataGuide_AAPF_RGB.md
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Expand Up @@ -53,36 +53,12 @@ Individual files (interim data products) are located under subdirectories. Filen

Example: VIS_V_2401323_240226103000057_RGB-SideSmall-30-MES_394_SandSoybeanHigh_240226105925431.png

- `VIS`
- Prefix indicating data from the visible light imaging chamber
- `<Data_Type>`
- R: raw image
- V: results derived from vegetation segments
- P: phenotypic parameters
- S: Sensor parameter (for internal reference only)
- `<POT_BARCODE>`
- Unique identifier for the plant pot
- `<Time_In>`
- Time (YYMMDDHHMMSS.SSS) when the pot entered the chamber
- `<RGB_FLUO>`
- Type of input sensor image (RGB or Fuorescence)
- `<View>`
- View from which the image was captured:
- Top: Top-down view
- Side{Bottom, Small, Top, Full}: RGB camera height at which the sensor is located
- `<Ang>`
- Angle of the camera (0, 30, ..., 330 for side views, 0 for top-down view)

- `<Img_Product>`
- Type of image product ([see images below](README_RGB.md#image-products-example-resized))
- PNG for RGB or flurescence image
- SEG for segmentation results
- MES for vegetation masking results augmented with morphological measurement info such as bounding box, convex hull
- `<Exp_No>`
- Experiment number within AAPF
- `<Treatment>`
- Treatment info
- `<Time_Out>`
- Time (YYMMDDHHMMSS.SSS) when the pot left the chamber


| Filename component | Description|
Expand All @@ -92,7 +68,7 @@ Example: VIS_V_2401323_240226103000057_RGB-SideSmall-30-MES_394_SandSoybeanHigh_
| `<POT_BARCODE>` | Unique identifier for the plant pot |
| `<Time_In>` | Time (YYMMDDHHMMSS.SSS) when the pot entered the chamber |
| `<RGB_FLUO>` | Type of input sensor image (RGB or Fuorescence) |
| `<View>` | View from which the image was captured:<br>Top: Top-down view<br>Side{Bottom, Small, Top, Full}: RGB camera height at which the sensor is located|
| `<View>` | View from which the image was captured:<br>Top: Top-down view<br>Side{Bottom, Small, Top, Full}: height at which RGB sensor is located|
| `<Ang>` | Angle of the camera (0, 30, ..., 330 for side views, 0 for top-down view) |
| `<Img_Product>`. | Type of image product ([see images below](https://github.itap.purdue.edu/PlantScience/DataExploration-AAPF/blob/main/DataGuide_AAPF_RGB.md#image-products-example-resized))<br>PNG for RGB or flurescence image<br>SEG for segmentation results<br>MES for vegetation masking results augmented with morphological measurement info such as bounding box, convex hull |
| `<Exp_No>` | Experiment number within AAPF |
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