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Update combine_covariates.py
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zhangdb authored May 20, 2022
1 parent 2300107 commit 9944d71
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion script/adj/combine_covariates.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
parser = argparse.ArgumentParser(description='Combine covariates into a single matrix')
parser.add_argument('expression_covariates', help='')
parser.add_argument('prefix', help='')
parser.add_argument('--genotype_pcs', default=None, help='Genotype PCs')
parser.add_argument('--genotype_pcs', default=None, help='PCs of genetic variants')
parser.add_argument('--add_covariates', default=[], nargs='+', help='Additional covariates')
parser.add_argument('-o', '--output_dir', default='.', help='Output directory')
args = parser.parse_args()
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