Update plink.sh

jiang548 · May 20, 2022 · dbf819b · dbf819b
1 parent d7a2d18
commit dbf819b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/script/geno_prep/plink.sh b/script/geno_prep/plink.sh
@@ -6,4 +6,4 @@ plink --silent --noweb --ped $pedfile --map $mapfile --geno $geno --hwe $hwe --r
 plink --silent --noweb --file $SIGNET_TMP_ROOT/tmpg/clean_Genotype --mind $mind --exclude $SIGNET_TMP_ROOT/tmpg/clean_Genotype.dupvar --recode --out $SIGNET_TMP_ROOT/tmpg/clean_Genotype --set-hh-missing &&
 plink --silent --noweb --file $SIGNET_TMP_ROOT/tmpg/clean_Genotype --recodeA --out $SIGNET_TMP_ROOT/tmpg/clean_Genotype --set-hh-missing &&
 tail -n+2 $SIGNET_TMP_ROOT/tmpg/clean_Genotype.raw > $SIGNET_TMP_ROOT/tmpg/clean_Genotype.data  &&
-echo -e "Preprocessing genotype data... Completed!\n"
+echo -e "Preprocessing genotype data... completed!\n"