Update adj_adjust_gtex.sh

jiang548 · May 20, 2022 · e8c3331 · e8c3331
1 parent 6627752
commit e8c3331
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/script/adj/adj_adjust_gtex.sh b/script/adj/adj_adjust_gtex.sh
@@ -16,7 +16,7 @@ $SIGNET_SCRIPT_ROOT/adj/combine_covariates.py --genotype_pcs="empty.txt" \
 empty.txt \
 all_covs_withoutigtpc_${tissue}_no_peer &&
 
-echo -e 'Begin Preprocessing ...\n'
+echo -e 'Adjusting gene expressions for covariate effects...\n'
 cd $SIGNET_TMP_ROOT/tmpa
 ## adjust expression by the covariates: top  pcs, without PEER factors, Sex, Platform, Protocol
 $SIGNET_SCRIPT_ROOT/adj/gexp_cov_adjust.py --expr ${rest}_expression_normalized_igt2log_GTEx_${tissue}.expression.bed.gz \